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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
50
muscle of arm
44
muscle of leg
39
muscle of back
17
psoas muscle
14
gastrocnemius medialis
13
muscle of trunk
13
skeletal muscle tissue
12
skeletal muscle satellite cell
9
skeletal muscle fiber
8
esophagus muscularis mucosa
7
stomach smooth muscle
7
type I muscle cell
7
type II muscle cell
6
LHCN-M2
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
skeletal muscle cell
4
A673
4
SJCRH30
4
myotube
4
rectum smooth muscle tissue
3
gastroesophageal sphincter
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
forelimb muscle
1
smooth muscle tissue
Disease term
3
Ewing sarcoma
Organ
4
musculature of body
Life stage
3
child
Date released
3
September, 2022
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
encode-ccres
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
software_used.software.name!
encode-ccres
biosample_term_name!
gastrocnemius medialis(Muscle - Skeletal)
Showing 4 of 4 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR705BMV
released
Annotation file set
: Chromatin states for BSS00035 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP