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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
4
cis-regulatory elements
Target gene links
Annotation type Category
4
ChIP-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
51
muscle of arm
44
muscle of leg
41
muscle of back
13
gastrocnemius medialis
13
skeletal muscle tissue
12
muscle of trunk
12
psoas muscle
11
skeletal muscle satellite cell
9
esophagus muscularis mucosa
9
skeletal muscle fiber
7
stomach smooth muscle
6
LHCN-M2
6
gastroesophageal sphincter
6
type I muscle cell
6
type II muscle cell
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
skeletal muscle cell
4
SJCRH30
4
myotube
3
A673
3
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
4
musculature of body
Life stage
1
unknown
Date released
3
February, 2021
1
October, 2022
Software used
2
macs
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_category!
Target gene links
Showing 4 of 4 results
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Download
FileSet
DSR198EWK
released
Annotation file set
: Binding sites annotation for myotube (HSMMtube) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR706TCC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE myotube
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR745RPS
released
Annotation file set
: Histone modifications annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR122YGR
released
Annotation file set
: Binding sites annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP