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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
49
muscle of arm
42
muscle of leg
41
muscle of back
12
gastrocnemius medialis
12
muscle of trunk
11
psoas muscle
9
skeletal muscle tissue
7
esophagus muscularis mucosa
7
stomach smooth muscle
6
gastroesophageal sphincter
4
skeletal muscle satellite cell
3
A673
3
LHCN-M2
3
SJCRH30
3
rectum smooth muscle tissue
3
skeletal muscle cell
1
forelimb muscle
1
hindlimb muscle
1
myotube
1
rectal smooth muscle tissue
1
skeletal muscle
Organ
3
musculature of body
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR404VRF
released
Annotation file set
: Candidate regulatory elements for BSS01572 skeletal muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR253DCD
released
Annotation file set
: Chromatin states for BSS01572 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR101OOW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP