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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
65
muscle of arm
55
muscle of leg
54
muscle of back
16
gastrocnemius medialis
16
muscle of trunk
15
psoas muscle
13
skeletal muscle tissue
9
esophagus muscularis mucosa
9
stomach smooth muscle
7
gastroesophageal sphincter
6
LHCN-M2
5
skeletal muscle satellite cell
4
A673
4
SJCRH30
4
myotube
4
rectum smooth muscle tissue
4
skeletal muscle cell
2
cardiac muscle myoblast
2
respiratory system smooth muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
forelimb muscle
1
hindlimb muscle
1
rectal smooth muscle tissue
1
skeletal muscle
1
smooth muscle tissue
Organ
4
musculature of body
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR404VRF
released
Annotation file set
: Candidate regulatory elements for BSS01572 skeletal muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR722IWA
released
Annotation file set
: Target gene predictions for BSS01572 skeletal muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR253DCD
released
Annotation file set
: Chromatin states for BSS01572 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR101OOW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP