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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
12
skeletal muscle satellite cell
11
esophagus muscularis mucosa
11
skeletal muscle tissue
9
skeletal muscle fiber
9
stomach smooth muscle
7
LHCN-M2
7
gastroesophageal sphincter
6
type I muscle cell
6
type II muscle cell
5
A673
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
4
myotube
4
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
skeletal muscle cell
2
somatic muscle myotube
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
2
musculature of body
Life stage
unknown
Date released
1
January, 2020
1
May, 2020
Software used
1
deltasvm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
unknown
Showing 2 of 2 results
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Download
FileSet
DSR592EHG
released
Annotation file set
: Genetic variants with deltaSVM predictions in skeletal muscle cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR310QRT
released
Annotation file set
: Accessible chromatin annotation of skeletal muscle cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP