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Annotation type
8
accessible chromatin
3
gene expression
2
variant allelic effects
1
caQTL
1
eQTL
1
target gene predictions
Annotation Category
8
cis-regulatory elements
Annotation type Category
8
snATAC-seq
Available data
8
bed bed3+
5
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
4
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
5
skeletal muscle fiber
5
skeletal muscle satellite cell
3
type I muscle cell
3
type II muscle cell
2
muscle of leg
1
hindlimb muscle
1
LHCN-M2
1
SJCRH30
1
esophagus muscularis mucosa
1
forelimb muscle
1
gastrocnemius medialis
1
muscle of arm
1
psoas muscle
1
skeletal muscle cell
Organ
8
musculature of body
Life stage
1
unknown
Date released
4
November, 2021
3
February, 2024
1
May, 2022
Software used
8
macs
Lab
4
Bing Ren, UCSD
3
Stephen Parker, UMich
1
AMP-T2D consortium
Project
4
AMP
4
ENCODE
RFA
4
ENCODE3
3
AMP2
1
AMP
Showing 8 of 8 results
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Download
FileSet
DSR331TEA
released
Annotation file set
: Accessible chromatin from snATAC-seq of type II muscle cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR940UYQ
released
Annotation file set
: Accessible chromatin annotation of Type II Skeletal Myocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR584RYA
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR222MBS
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR958BVX
released
Annotation file set
: Accessible chromatin annotation of Fetal Skeletal Myocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR816KKF
released
Annotation file set
: Cell type chromatin broad peaks and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR887UQH
released
Annotation file set
: Cell type chromatin broad peaks and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR353GUO
released
Annotation file set
: Cell type chromatin broad peaks and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP