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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
2
candidate regulatory elements
2
chromatin state
2
gene expression
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
2
bed bed9
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
32
muscle of arm
29
muscle of leg
26
muscle of back
12
psoas muscle
9
gastrocnemius medialis
9
muscle of trunk
6
skeletal muscle tissue
5
stomach smooth muscle
4
esophagus muscularis mucosa
4
skeletal muscle satellite cell
3
A673
3
rectum smooth muscle tissue
2
LHCN-M2
2
SJCRH30
2
gastroesophageal sphincter
2
skeletal muscle cell
1
myotube
1
skeletal muscle
1
type I muscle cell
1
type II muscle cell
Organ
4
musculature of body
Life stage
3
adult
Date released
2
September, 2022
1
November, 2021
1
October, 2019
Software used
2
chromhmm
1
abc
1
r
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR326ORZ
released
Annotation file set
: Target gene predictions for BSS01576 skeletal muscle satellite cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365BMM
released
Annotation file set
: Chromatin states for BSS01576 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR920UVL
released
Annotation file set
: Target gene predictions of Satellite Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR195QYE
released
Annotation file set
: ChromHMM 15-state model for adult Skeletal Muscle Satellite Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP