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Citing CMDGA
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Annotation type
146
candidate regulatory elements
80
target gene predictions
74
chromatin state
27
accessible chromatin
7
binding sites
7
histone modifications
7
variant allelic effects
6
gene expression
5
eQTL
2
caQTL
Annotation Category
6
Gene expression levels
Annotation type Category
5
snRNA-seq
1
RNA-seq
Available data
tsv
File set status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
2
skeletal muscle fiber
2
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
19
epithelium
9
pancreas
8
connective tissue
7
kidney
6
musculature of body
4
heart
4
liver
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
pericardium
Life stage
1
adult
Date released
5
February, 2024
1
February, 2020
Software used
6
r
5
deeptools
5
samtools
5
umitools
Lab
5
Stephen Parker, UMich
1
AMP-T2D consortium
Project
6
AMP
RFA
5
AMP2
1
AMP
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Showing 6 of 6 results
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FileSet
DSR522PJU
released
Annotation file set
: Cell type gene expression mean TPM and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR040MIE
released
Annotation file set
: Cell type gene expression mean TPM and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR147UBG
released
Annotation file set
: Gene expression levels of Skeletal muscle satellite cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP