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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
34
muscle of arm
31
muscle of leg
26
muscle of back
13
psoas muscle
11
skeletal muscle satellite cell
10
gastrocnemius medialis
9
muscle of trunk
9
skeletal muscle fiber
9
skeletal muscle tissue
7
type I muscle cell
7
type II muscle cell
6
esophagus muscularis mucosa
5
LHCN-M2
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
stomach smooth muscle
4
myotube
4
skeletal muscle cell
3
A673
3
SJCRH30
3
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
gastroesophageal sphincter
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
forelimb muscle
1
smooth muscle tissue
Organ
3
musculature of body
Life stage
2
child
Date released
2
September, 2022
1
June, 2020
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
August, 2021
annotation_type!
candidate regulatory elements
Showing 3 of 3 results
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Download
FileSet
DSR359BQQ
released
Annotation file set
: Target gene predictions for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR863JWS
released
Annotation file set
: Chromatin states for BSS01549 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR907POK
released
Annotation file set
: Accessible chromatin annotation for Muscle SJCRH30 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP