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Annotation type
17
accessible chromatin
5
binding sites
5
gene expression
5
target gene predictions
4
candidate regulatory elements
3
chromatin state
3
histone modifications
3
variant allelic effects
2
caQTL
2
eQTL
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
2
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
70
tissue
5
primary cell
4
cell line
1
in vitro differentiated cells
Biosample term
2
skeletal muscle satellite cell
1
skeletal muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
114
epithelium
50
connective tissue
26
skin of body
24
pancreas
18
vasculature
12
blood vessel
11
mammary gland
9
extraembryonic component
9
kidney
8
heart
8
intestine
8
lung
7
penis
5
embryo
5
musculature of body
4
adrenal gland
4
brain
4
liver
4
stomach
4
vein
3
artery
3
bone element
3
bone marrow
3
bronchus
3
esophagus
3
eye
3
large intestine
3
lymphatic vessel
3
prostate gland
2
small intestine
1
gonad
1
limb
1
mouth
1
ovary
1
placenta
1
spinal cord
1
thyroid gland
1
uterus
Life stage
1
adult
1
unknown
Date released
3
November, 2021
2
September, 2022
Software used
3
abc
2
r
Lab
3
Bing Ren, UCSD
2
AMP-T2D consortium
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
month_released!
February, 2020
Showing 5 of 5 results
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Download
FileSet
DSR326ORZ
released
Annotation file set
: Target gene predictions for BSS01576 skeletal muscle satellite cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR722IWA
released
Annotation file set
: Target gene predictions for BSS01572 skeletal muscle cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR018YPM
released
Annotation file set
: Target gene predictions of Type II Skeletal Myocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR232VYZ
released
Annotation file set
: Target gene predictions of Type I Skeletal Myocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR920UVL
released
Annotation file set
: Target gene predictions of Satellite Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE