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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
1
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
3
cell line
2
in vitro differentiated cells
Biosample term
66
muscle of arm
56
muscle of leg
54
muscle of back
21
foreskin keratinocyte
19
keratinocyte
19
psoas muscle
18
foreskin fibroblast
17
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
12
fibroblast of dermis
10
dermis blood vessel endothelial cell
10
esophagus muscularis mucosa
10
lower leg skin
9
skin fibroblast
9
stomach smooth muscle
8
dermis lymphatic vessel endothelial cell
8
skeletal muscle satellite cell
7
gastroesophageal sphincter
6
GM23248
6
LHCN-M2
6
skin of body
5
A673
5
SK-MEL-5
5
gastrocnemius medialis(Muscle - Skeletal)
5
iPS DF 19.11
5
iPS DF 4.7 Cell Line
5
left ventricle myocardium
5
myotube
5
skeletal muscle cell
4
RPMI7951
4
SJCRH30
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
rectum smooth muscle tissue
4
skeletal muscle fiber
4
type I muscle cell
4
type II muscle cell
3
COLO829
3
dermis microvascular lymphatic vessel endothelial cell
3
epidermal melanocyte
3
suprapubic skin
2
muscle of leg
2
cardiac muscle myoblast
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
somatic muscle myotube
1
hindlimb muscle
1
BJ
1
HGPS cell
1
aortic smooth muscle cell
1
basal cell of epidermis
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
forelimb muscle
1
granular cell of epidermis
1
hindlimb muscle
1
iPS DF 4.7
1
rectal smooth muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
smooth muscle tissue
Organ
5
skin of body
0
musculature of body
Life stage
3
newborn
Date released
3
September, 2022
2
February, 2021
Software used
2
macs
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
accessible chromatin
Showing 5 of 5 results
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Download
FileSet
DSR771DBM
released
Annotation file set
: Candidate regulatory elements for BSS00733 iPS DF 4.7 Cell Line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR480HBB
released
Annotation file set
: Target gene predictions for BSS00733 iPS DF 4.7 Cell Line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250AAT
released
Annotation file set
: Chromatin states for BSS00733 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR867YYD
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell iPS_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR475VMZ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell iPS_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP