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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
50
muscle of arm
44
muscle of leg
39
muscle of back
17
psoas muscle
14
gastrocnemius medialis
13
foreskin keratinocyte
13
keratinocyte
13
muscle of trunk
12
skeletal muscle satellite cell
11
fibroblast of dermis
11
skeletal muscle tissue
10
foreskin fibroblast
10
skin fibroblast
9
skeletal muscle fiber
8
esophagus muscularis mucosa
7
stomach smooth muscle
7
type I muscle cell
7
type II muscle cell
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
lower leg skin
6
skin of body
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
skeletal muscle cell
4
A673
4
GM23248
4
LHCN-M2
4
RPMI7951
4
SJCRH30
4
iPS DF 19.11
4
iPS DF 4.7 Cell Line
4
rectum smooth muscle tissue
3
COLO829
3
SK-MEL-5
3
epidermal melanocyte
3
gastroesophageal sphincter
3
iPS DF 19.7
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
2
hindlimb muscle
2
muscle of leg
2
basal cell of epidermis
2
granular cell of epidermis
2
myotube
2
skeletal muscle
1
HGPS cell
1
dermis microvascular lymphatic vessel endothelial cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
fibroblast of arm
1
forelimb muscle
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Disease term
3
Ewing sarcoma
Organ
4
musculature of body
0
skin of body
Life stage
3
child
Date released
3
September, 2022
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR705BMV
released
Annotation file set
: Chromatin states for BSS00035 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP