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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
50
muscle of arm
44
muscle of leg
39
muscle of back
17
psoas muscle
14
gastrocnemius medialis
13
foreskin keratinocyte
13
keratinocyte
13
muscle of trunk
12
skeletal muscle satellite cell
11
fibroblast of dermis
11
skeletal muscle tissue
10
foreskin fibroblast
10
skin fibroblast
9
skeletal muscle fiber
8
esophagus muscularis mucosa
7
stomach smooth muscle
7
type I muscle cell
7
type II muscle cell
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
lower leg skin
6
skin of body
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
skeletal muscle cell
4
A673
4
GM23248
4
LHCN-M2
4
RPMI7951
4
SJCRH30
4
iPS DF 19.11
4
iPS DF 4.7 Cell Line
4
rectum smooth muscle tissue
3
COLO829
3
SK-MEL-5
3
epidermal melanocyte
3
gastroesophageal sphincter
3
iPS DF 19.7
3
iPS DF 6.9
3
iPS-11a
3
iPS-15b
3
iPS-18a
3
iPS-18c
3
iPS-20b
2
hindlimb muscle
2
muscle of leg
2
basal cell of epidermis
2
granular cell of epidermis
2
myotube
2
skeletal muscle
1
HGPS cell
1
dermis microvascular lymphatic vessel endothelial cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
fibroblast of arm
1
forelimb muscle
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
4
connective tissue
4
limb
4
skin of body
0
musculature of body
Life stage
3
adult
Date released
February, 2021
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR449IDP
released
Annotation file set
: Candidate regulatory elements for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR448QKS
released
Annotation file set
: Target gene predictions for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757SGA
released
Annotation file set
: Accessible chromatin annotation for Epidermis Dermal fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP