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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
21
coronary artery
20
endothelial cell of umbilical vein
20
psoas muscle
19
tibial artery
18
gastrocnemius medialis
17
muscle of trunk
16
ascending aorta
16
endothelial cell of hepatic sinusoid
16
skeletal muscle tissue
13
aorta
13
skeletal muscle satellite cell
11
esophagus muscularis mucosa
11
thoracic aorta
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
9
skeletal muscle fiber
9
stomach smooth muscle
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
LHCN-M2
7
gastroesophageal sphincter
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
7
type I muscle cell
7
type II muscle cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
A673
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
SJCRH30
5
Vascular Smooth Muscle Cell / Pericyte
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney capillary endothelial cell
5
left ventricle myocardium
5
lung microvascular endothelial cell
5
myotube
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
pancreatic endothelial cell
4
rectum smooth muscle tissue
4
vascular associated smooth muscle cell
2
hindlimb muscle
2
muscle of leg
2
capillary endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
cardiac fibroblast
1
circle of Willis
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
placental villus capillary endothelial cell
1
rectal smooth muscle tissue
1
smooth muscle tissue
1
whole blood
Disease term
3
Ewing sarcoma
Organ
5
musculature of body
0
vasculature
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR705BMV
released
Annotation file set
: Chromatin states for BSS00035 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR958EYW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A673
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP