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Citing CMDGA
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Annotation type
3
chromatin state
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
2
RNA-seq
Available data
bed bed3+
3
bed bed9
1
tsv
File set status
5
released
Genome assembly (visualization)
4
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
11
tibial nerve
6
ovary
5
testis
1
Leydig cell
1
NT2-D1 cell
Organ
5
gonad
5
testis
0
nerve
Life stage
3
adult
1
embryonic
Date released
3
September, 2022
1
January, 2022
1
March, 2024
Software used
3
chromhmm
1
qTLtools
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
bed bed3+
Showing 5 of 5 results
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FileSet
DSR562FVN
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Testis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR845ZVQ
released
Annotation file set
: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR211VUO
released
Annotation file set
: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR666MOR
released
Annotation file set
: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823HJA
released
Annotation file set
: testis eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP