Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
accessible chromatin
11
candidate regulatory elements
10
target gene predictions
6
binding sites
6
chromatin state
6
gene expression
4
histone modifications
3
variant allelic effects
2
caQTL
2
eQTL
Annotation Category
6
Gene expression levels
Annotation type Category
5
snRNA-seq
1
RNA-seq
File set status
6
released
Genome assembly (visualization)
5
hg19
Organism
6
Homo sapiens
Biosample type
tissue
6
primary cell
Biosample term
2
skeletal muscle fiber
2
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
251
epithelium
192
kidney
35
pancreas
33
connective tissue
31
vasculature
22
liver
20
blood vessel
10
embryo
6
artery
6
heart
6
musculature of body
3
lymphatic vessel
1
adipose tissue
1
brain
1
pericardium
0
nerve
Life stage
1
adult
Date released
5
February, 2024
1
February, 2020
Software used
6
r
5
deeptools
5
samtools
5
umitools
Lab
5
Stephen Parker, UMich
1
AMP-T2D consortium
Project
6
AMP
RFA
5
AMP2
1
AMP
biosample_type!
tissue
Showing 6 of 6 results
table-tab-icon
matrix-icon
FileSet
DSR522PJU
released
Annotation file set
: Cell type gene expression mean TPM and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR040MIE
released
Annotation file set
: Cell type gene expression mean TPM and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR147UBG
released
Annotation file set
: Gene expression levels of Skeletal muscle satellite cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP