Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
3
differential activity
3
gene expression
3
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
3
bigWig
1
bam
1
bed gappedPeak
1
bigBed narrowPeak
1
xls
File set status
4
released
Genome assembly (visualization)
7
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
7
EndoC_BH1
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
pancreatic ductal cell
2
islet of Langerhans
2
pancreas
2
pancreatic acinar cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
Organ
4
epithelium
4
pancreas
Life stage
1
adult
1
unknown
Date released
2
January, 2021
1
February, 2024
1
September, 2022
Software used
4
macs
Lab
3
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
2
AMP
2
T1D
RFA
2
AMP
2
T1D
assembly!
GRCh38
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR938VDA
released
Annotation file set
: Accessible chromatin from snATAC-seq of alpha cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR018TPI
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of GCGlow_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR185GHH
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of GCGhigh_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR593VJK
released
Annotation file set
: pancreatic alpha cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP