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Schema
Citing CMDGA
Clear Filters
Annotation type
14
eQTL
13
gene expression
8
candidate regulatory elements
7
accessible chromatin
7
chromatin state
6
target gene predictions
5
Fine-mapped variants
2
binding sites
2
sQTL
2
variant allelic effects
2
variant to gene
1
histone modifications
Annotation Category
6
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
5
body of pancreas
5
pancreas
4
endocrine pancreas
4
pancreatic delta cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
islet of Langerhans
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Organ
6
pancreas
Life stage
5
adult
Date released
4
September, 2022
1
January, 2020
1
May, 2021
Software used
4
r
1
abc
1
chicago
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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FileSet
DSR768RQL
released
Annotation file set
: Target gene predictions for BSS00124 body of pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR074WGL
released
Annotation file set
: Target gene predictions for BSS00123 body of pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR547MKV
released
Annotation file set
: Target gene predictions for BSS00122 body of pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR653RNT
released
Annotation file set
: Target gene predictions for BSS00121 body of pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497YZL
released
Annotation file set
: enhancer-gene predicton of body_of_pancreas-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR299XDW
released
Annotation file set
: Target gene prediction annotation derived from chromatin loops in islet pcHi-C
Lab:
AMP-T2D consortium
Project:
AMP