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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
5
candidate regulatory elements
5
target gene predictions
3
chromatin state
1
binding sites
1
eQTL
1
histone modifications
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
2
bed bed9
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
5
body of pancreas
4
endocrine pancreas
4
islet of Langerhans
4
pancreas
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
Panc1
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
Organ
4
pancreas
Life stage
3
adult
Date released
2
September, 2022
1
August, 2017
1
May, 2020
Software used
3
chromhmm
1
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR684WDC
released
Annotation file set
: Chromatin states for BSS01407 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR892WTG
released
Annotation file set
: Chromatin states for BSS01406 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848MLC
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR608480
released
Annotation file set
: ChromHMM 18-state model for Pancreas
Lab:
AMP-T2D consortium
Project:
AMP