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Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
13
DNase-seq
12
ChIP-seq
4
snATAC-seq
2
ATAC-seq
2
scRNA-seq
1
H3K27ac ChIP-Seq
1
HiC
1
RNA-seq
1
pCHi-C
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
9
EndoC_BH1
6
islet of Langerhans
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
pancreas
2
pancreatic beta cell
1
Panc1
1
body of pancreas
1
pancreatic alpha cell
1
pancreatic delta cell
Organ
2
pancreas
Life stage
1
adult
Date released
1
May, 2021
1
October, 2019
Software used
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR213AOJ
released
Annotation file set
: enhancer-gene predicton of pancreas-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR874TCD
released
Annotation file set
: Body of pancreas accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP