Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
accessible chromatin
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
scRNA-seq
1
snATAC-seq
Available data
1
bam
1
bed bed3+
1
bed gappedPeak
1
tsv
1
xls
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
42
islet of Langerhans
24
body of pancreas
22
pancreas
21
EndoC_BH1
15
endocrine pancreas
13
pancreatic ductal cell
6
pancreatic acinar cell
5
Panc1
5
pancreatic beta cell
4
pancreatic alpha cell
3
8988T
3
HPDE6-E6E7
3
pancreatic delta cell
2
pancreatic endocrine cell
2
pancreatic polypeptide-secreting cell
1
activated pancreatic stellate cell
1
pancreatic A cell
1
pancreatic stellate cell
1
quiescent pancreatic stellate cell
1
type B pancreatic cell
Organ
3
epithelium
3
pancreas
Life stage
1
adult
1
unknown
Date released
November, 2021
1
August, 2018
1
May, 2021
1
September, 2022
Software used
2
r
1
macs
Lab
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
November, 2021
lab.title!
Kyle Gaulton, UCSD
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR025RWZ
released
Annotation file set
: Accessible chromatin from snATAC-seq of delta cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR678BGL
released
Annotation file set
: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic delta cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR685JLX
released
Annotation file set
: pancreatic delta cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP