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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
2
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
RNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
bed bed9
1
tsv
File set status
8
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
61
HeLa-S3
45
islet of Langerhans
25
pancreatic ductal cell
21
EndoC_BH1
20
body of pancreas
20
pancreas
18
pancreatic acinar cell
18
pancreatic beta cell
17
pancreatic alpha cell
16
pancreatic delta cell
11
endocrine pancreas
10
pancreatic stellate cell
8
uterus
6
pancreatic polypeptide-secreting cell
4
Ishikawa
4
Panc1
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
type B pancreatic cell
3
pancreatic quiescent stellate cell
2
8988T
2
HPDE6-E6E7
2
endometrium cancer
2
pancreatic endocrine cell
2
uterine smooth muscle cell
1
activated pancreatic stellate cell
1
cervix - ectocervix
1
endometrium
1
pancreatic D cell
1
pancreatic PP cell
1
quiescent pancreatic stellate cell
Organ
8
uterus
0
pancreas
Life stage
5
adult
Date released
2
February, 2021
2
September, 2022
1
January, 2022
1
June, 2020
1
March, 2024
1
May, 2021
Software used
3
r
2
encode-ccres
1
abc
1
macs
1
qTLtools
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
files.file_type!
bed bed9
Showing 8 of 8 results
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Download
FileSet
DSR606YST
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Uterus.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR903VBR
released
Annotation file set
: Candidate regulatory elements for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572QKZ
released
Annotation file set
: uterus eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196WYN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703DFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR373YCF
released
Annotation file set
: Accessible chromatin annotation for Uterus Uterus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP