Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
36
islet of Langerhans
21
EndoC_BH1
21
pancreatic ductal cell
20
body of pancreas
17
pancreas
17
pancreatic acinar cell
17
pancreatic beta cell
16
pancreatic delta cell
15
pancreatic alpha cell
12
endocrine pancreas
10
pancreatic stellate cell
6
pancreatic polypeptide-secreting cell
4
Panc1
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
type B pancreatic cell
3
8988T
3
HPDE6-E6E7
3
pancreatic quiescent stellate cell
1
activated pancreatic stellate cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endocrine cell
1
quiescent pancreatic stellate cell
Disease term
3
pancreatic ductal adenocarcinoma
Organ
4
pancreas
Life stage
3
unknown
Date released
3
September, 2022
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR623CCG
released
Annotation file set
: Candidate regulatory elements for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898MBY
released
Annotation file set
: Target gene predictions for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZNU
released
Annotation file set
: Chromatin states for BSS01405 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988OGT
released
Annotation file set
: enhancer-gene predicton of Panc1-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP