Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
12
accessible chromatin
8
target gene predictions
5
candidate regulatory elements
3
chromatin state
3
differential activity
3
gene expression
1
binding sites
1
eQTL
1
histone modifications
1
variant allelic effects
Annotation Category
8
Target gene links
Annotation type Category
3
DNase-seq
3
snATAC-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
1
pCHi-C
Available data
8
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
5
tissue
3
primary cell
Biosample term
5
body of pancreas
5
pancreas
4
endocrine pancreas
4
pancreatic delta cell
3
pancreatic A cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic ductal cell
3
type B pancreatic cell
2
Panc1
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
islet of Langerhans
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
Organ
8
pancreas
3
epithelium
Life stage
4
adult
Date released
2
January, 2021
2
March, 2020
2
September, 2022
1
February, 2021
1
May, 2021
Software used
3
cicero
2
r
1
abc
1
hiccups
1
nospecificsoft_customcode
Lab
4
AMP-T2D consortium
3
Kyle Gaulton, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
2
T1D
RFA
6
AMP
2
T1D
month_released!
May, 2020
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
FileSet
DSR310PTQ
released
Annotation file set
: Target gene predictions for BSS01407 pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR352GMB
released
Annotation file set
: Target gene predictions for BSS01406 pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213AOJ
released
Annotation file set
: enhancer-gene predicton of pancreas-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR746SVT
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGlow_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR998IGH
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of GCGhigh_alpha
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR462PPV
released
Annotation file set
: A target gene prediction annotation in pancreas of DSR905BNL Hi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR304SKW
released
Annotation file set
: A target gene prediction annotation in Human Pancreas of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014OEB
released
Annotation file set
: pancreatic alpha cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP