Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
61
accessible chromatin
48
gene expression
33
differential activity
30
target gene predictions
15
eQTL
11
candidate regulatory elements
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
4
chromatin state
2
sQTL
2
variant to gene
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
2
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
3
islet of Langerhans
1
pancreas
Organ
15
heart
12
brain
9
blood vessel
9
vasculature
8
connective tissue
6
musculature of body
5
epithelium
4
intestine
4
limb
4
pancreas
3
large intestine
3
liver
3
vein
2
adipose tissue
2
artery
2
blood
2
bodily fluid
2
kidney
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
nerve
1
skin of body
1
small intestine
1
stomach
Date released
September, 2022
3
August, 2017
1
April, 2019
Software used
4
chromhmm
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
TSTSR037617
released
Annotation file set
: Chromatin States from Gaulton lab at UCSD for islet
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
TSTSR679993
released
Annotation file set
: ChromHMM 13-state model for Islets
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR608480
released
Annotation file set
: ChromHMM 18-state model for Pancreas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR043890
released
Annotation file set
: ChromHMM 18-state model for Islets
Lab:
AMP-T2D consortium
Project:
AMP