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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
variant allelic effects
Annotation Category
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
3
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
3
islet of Langerhans
1
EndoC_BH1
1
body of pancreas
1
pancreas
Organ
4
pancreas
Life stage
3
adult
Date released
13
February, 2021
13
September, 2022
8
August, 2021
6
March, 2020
6
March, 2023
4
May, 2020
4
May, 2021
3
January, 2022
2
August, 2017
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2024
1
January, 2018
1
June, 2020
1
November, 2019
1
November, 2021
Software used
2
deltasvm
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR941LPG
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 5 T2D samples with most significant peak selected.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR610XQN
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 38 non-diabetic samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159BKA
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic islet ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR993IYU
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas body DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP