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Citing CMDGA
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Annotation type
6
accessible chromatin
3
differential activity
3
gene expression
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
39
H1-hESC
8
H9
7
trophoblast cell
5
body of pancreas
5
pancreas
4
CyT49
4
HUES8
4
chorionic villus
4
endocrine pancreas
3
pancreatic A cell
3
trophoblast
3
type B pancreatic cell
2
H7-hESC
2
Panc1
2
endodermal cell
2
pancreatic acinar cell
2
pancreatic delta cell
2
pancreatic ductal cell
1
8988T
1
ELF-1
1
ES-I3
1
EndoC_BH1
1
H4
1
HPDE6-E6E7
1
HUES48
1
HUES6
1
HUES64
1
UCSF-4
1
cardiac mesoderm primordium
1
ectodermal cell
1
embryonic facial prominence
1
islet of Langerhans
1
mesodermal cell
1
pancreatic alpha cell
1
pancreatic beta cell
Organ
1
epithelium
1
pancreas
0
embryo
Life stage
1
adult
Date released
January, 2021
1
February, 2021
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
month_released!
January, 2021
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Download
FileSet
DSR376KYK
released
Annotation file set
: pancreatic beta cell co-accessibility linking chromatin sites to gene promoters annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP