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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
cell line
Biosample term
32
adipose tissue
21
subcutaneous adipose tissue
18
omental fat pad
14
prostate gland
12
epithelial cell of prostate
10
22Rv1
7
LNCaP clone FGC
7
PC-3
7
RWPE1
6
LNCAP
6
subcutaneous abdominal adipose tissue
4
C4-2B
4
RWPE2
4
VCaP cell
4
visceral abdominal adipose tissue
2
adipose tissue derived mesenchymal stem cell
1
omental fat pad
1
VCaP
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
luminal epithelial cell of prostatic duct
1
mesenchymal stem cell of adipose
1
prostate
1
white adipose cell
1
white adipose tissue
Organ
6
prostate gland
0
adipose tissue
Life stage
2
adult
Date released
4
February, 2021
1
June, 2020
1
May, 2021
Software used
3
macs
2
encode-ccres
1
abc
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR718TWX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCAP
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543HLI
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCAP
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835IJD
released
Annotation file set
: Histone modifications annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR144WDI
released
Annotation file set
: Binding sites annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR563FIF
released
Annotation file set
: enhancer-gene predicton of LNCAP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR475PYM
released
Annotation file set
: Accessible chromatin annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP