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Citing CMDGA
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Annotation type
7
candidate regulatory elements
5
target gene predictions
4
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
5
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
cell line
Biosample term
4
endothelial cell of umbilical vein
3
epithelial cell of prostate
2
22Rv1
2
LNCaP clone FGC
2
prostate gland
1
C4-2B
1
LNCAP
1
PC-3
1
RWPE1
1
RWPE2
1
VCaP cell
Disease term
2
prostate adenocarcinoma
Organ
5
prostate gland
3
epithelium
0
vein
Life stage
2
adult
2
unknown
Date released
4
September, 2022
1
May, 2021
Software used
4
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR064OVE
released
Annotation file set
: Target gene predictions for BSS01174 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159ULI
released
Annotation file set
: Target gene predictions for BSS01173 LNCaP clone FGC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120KRM
released
Annotation file set
: Target gene predictions for BSS00309 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498KQI
released
Annotation file set
: Target gene predictions for BSS00308 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR327KAR
released
Annotation file set
: enhancer-gene predicton of epithelial_cell_of_prostate-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP