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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
4
target gene predictions
3
chromatin state
1
binding sites
Annotation Category
4
Target gene links
4
cis-regulatory elements
Annotation type Category
7
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
3
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
3
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
15
keratinocyte
10
foreskin fibroblast
10
foreskin keratinocyte
9
skin fibroblast
8
fibroblast of dermis
5
dermis lymphatic vessel endothelial cell
5
skin of body
4
GM23248
4
dermis blood vessel endothelial cell
4
iPS DF 4.7 Cell Line
4
lower leg skin
3
RPMI7951
3
iPS DF 19.11
2
COLO829
2
SK-MEL-5
2
basal cell of epidermis
2
dermis microvascular lymphatic vessel endothelial cell
2
epidermal melanocyte
2
granular cell of epidermis
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
1
HGPS cell
1
fibroblast of arm
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
skin of forearm
1
skin of prepuce of penis
Organ
8
connective tissue
8
skin of body
Life stage
4
unknown
2
adult
Date released
6
September, 2022
1
May, 2021
1
October, 2022
Software used
4
chromhmm
3
r
1
abc
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
annotation_type!
candidate regulatory elements
histone modifications
Showing 8 of 8 results
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Download
FileSet
DSR441OMK
released
Annotation file set
: Binding sites annotation for fibroblast of dermis (NHDF-Ad) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947YQM
released
Annotation file set
: Target gene predictions for BSS00337 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR226OCD
released
Annotation file set
: Target gene predictions for BSS00335 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885BWY
released
Annotation file set
: Target gene predictions for BSS00334 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR015YPE
released
Annotation file set
: Chromatin states for BSS00337 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR100UEK
released
Annotation file set
: Chromatin states for BSS00335 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR175FVS
released
Annotation file set
: Chromatin states for BSS00334 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627NNY
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_dermis-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP