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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
21
renal pelvis
18
keratinocyte
12
foreskin fibroblast
11
foreskin keratinocyte
10
skin fibroblast
8
fibroblast of dermis
6
dermis lymphatic vessel endothelial cell
6
left renal pelvis
6
right renal pelvis
5
GM23248
5
iPS DF 4.7 Cell Line
5
skin of body
4
dermis blood vessel endothelial cell
4
lower leg skin
3
RPMI7951
3
SK-MEL-5
3
iPS DF 19.11
2
COLO829
2
basal cell of epidermis
2
dermis microvascular lymphatic vessel endothelial cell
2
epidermal melanocyte
2
granular cell of epidermis
2
iPS DF 19.7
2
iPS DF 6.9
2
iPS-11a
2
iPS-15b
2
iPS-18a
2
iPS-18c
2
iPS-20b
2
skin of forearm
2
skin of prepuce of penis
1
HGPS cell
1
fibroblast of arm
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
4
limb
4
skin of body
0
ureter
Life stage
4
adult
Date released
4
September, 2022
Software used
2
chromhmm
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
candidate regulatory elements
Showing 4 of 4 results
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Download
FileSet
DSR302LIQ
released
Annotation file set
: Target gene predictions for BSS01182 lower leg skin from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR662ADJ
released
Annotation file set
: Target gene predictions for BSS01181 lower leg skin from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR015XPU
released
Annotation file set
: Chromatin states for BSS01182 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR867RLZ
released
Annotation file set
: Chromatin states for BSS01181 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP