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Annotation type
7
target gene predictions
1
variant allelic effects
Annotation Category
cis-regulatory elements
7
Target gene links
1
Genetic variant effects
Annotation type Category
5
DNase-seq
4
ChIP-seq
3
ATAC-seq
1
H3K27ac ChIP-Seq
1
snATAC-seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
Biosample term
6
keratinocyte
4
fibroblast of dermis
4
foreskin keratinocyte
4
skin of body
3
foreskin fibroblast
3
skin fibroblast
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
iPS DF 19.11
2
lower leg skin
1
COLO829
1
GM23248
1
RPMI7951
1
SK-MEL-5
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
8
epithelium
8
skin of body
2
blood vessel
2
vasculature
Life stage
2
unknown
1
adult
1
newborn
Date released
4
September, 2022
2
November, 2021
1
February, 2024
1
May, 2021
Software used
4
r
3
abc
1
deltasvm
Lab
4
AMP-T2D consortium
3
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
2
ENCODE
RFA
6
AMP
2
ENCODE3
annotation_category!
cis-regulatory elements
Showing 8 of 8 results
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Download
FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR119FPX
released
Annotation file set
: Target gene predictions for BSS00260 dermis blood vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR170NAG
released
Annotation file set
: Target gene predictions for BSS00258 dermis blood vessel endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP