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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
binding sites
3
candidate regulatory elements
3
chromatin state
3
histone modifications
2
accessible chromatin
1
variant allelic effects
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
4
bed bed3+
2
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
cell line
Biosample term
6
keratinocyte
5
foreskin keratinocyte
4
foreskin fibroblast
3
dermis lymphatic vessel endothelial cell
3
fibroblast of dermis
3
skin fibroblast
2
GM23248
2
SK-MEL-5
2
dermis blood vessel endothelial cell
2
iPS DF 4.7 Cell Line
2
lower leg skin
1
COLO829
1
RPMI7951
1
epidermal melanocyte
1
iPS DF 19.11
1
iPS DF 19.7
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin of body
1
skin of forearm
1
skin of prepuce of penis
Organ
6
epithelium
6
skin of body
Life stage
2
unknown
Date released
3
February, 2021
2
September, 2022
1
August, 2017
Software used
3
chromhmm
3
macs
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR550OVN
released
Annotation file set
: Chromatin states for BSS01071 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR081LIX
released
Annotation file set
: Chromatin states for BSS01068 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR799BPM
released
Annotation file set
: Histone modifications annotation for Epidermis Keratinocyte_progenitors from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR740HVM
released
Annotation file set
: Histone modifications annotation for Epidermis HaCaT from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855ZQV
released
Annotation file set
: Histone modifications annotation for Epidermis Dombi23 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR926942
released
Annotation file set
: ChromHMM 13-state model for NHEK
Lab:
Stephen Parker, UMich
Project:
AMP