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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
1
variant allelic effects
Annotation Category
3
Target gene links
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
ChIP-seq
3
ATAC-seq
3
snATAC-seq
2
DNase-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
2
bigWig
File set status
6
released
Genome assembly (visualization)
6
hg19
4
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
6
keratinocyte
4
skin fibroblast
3
skin of body
2
basal cell of epidermis
2
foreskin fibroblast
2
granular cell of epidermis
1
GM23248
1
RPMI7951
1
dermis microvascular lymphatic vessel endothelial cell
1
fibroblast of arm
1
fibroblast of dermis
1
foreskin keratinocyte
1
iPS DF 19.11
1
iPS DF 4.7 Cell Line
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
6
epithelium
6
skin of body
Date released
4
November, 2021
1
February, 2024
1
May, 2021
Software used
3
abc
2
macs
1
deltasvm
Lab
5
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
4
ENCODE
2
AMP
RFA
4
ENCODE3
2
AMP
month_released!
September, 2022
annotation_type_category!
ChIP-seq
Showing 6 of 6 results
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Download
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR919NQU
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR774OBV
released
Annotation file set
: Accessible chromatin annotation of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP