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Citing CMDGA
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Annotation type
5
target gene predictions
3
candidate regulatory elements
3
chromatin state
2
accessible chromatin
2
histone modifications
1
binding sites
1
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
3
DNase-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
5
keratinocyte
4
fibroblast of dermis
4
foreskin keratinocyte
3
skin fibroblast
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
foreskin fibroblast
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
Organ
5
epithelium
5
skin of body
Life stage
2
unknown
Date released
2
November, 2021
2
September, 2022
1
May, 2021
Software used
3
abc
2
r
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
3
AMP
2
ENCODE
RFA
3
AMP
2
ENCODE3
organ_slims!
embryo
Showing 5 of 5 results
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FileSet
DSR125EUW
released
Annotation file set
: Target gene predictions for BSS01071 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR555IYR
released
Annotation file set
: Target gene predictions for BSS01068 keratinocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR681TKD
released
Annotation file set
: Target gene predictions of Keratinocyte 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR385FIQ
released
Annotation file set
: Target gene predictions of Keratinocyte 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR926EGV
released
Annotation file set
: enhancer-gene predicton of keratinocyte-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP