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Schema
Citing CMDGA
Clear Filters
Annotation type
93
candidate regulatory elements
72
accessible chromatin
53
target gene predictions
44
chromatin state
24
binding sites
17
histone modifications
4
eQTL
3
gene expression
3
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
2
DNase-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
retinal pigment epithelial cell
1
keratinocyte
1
retina
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Date released
2
May, 2020
1
February, 2024
Software used
3
deltasvm
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR787MHT
released
Annotation file set
: Genetic variants with deltaSVM predictions in retinal pigment epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757CEL
released
Annotation file set
: Genetic variants with deltaSVM predictions in retina DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP