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Schema
Citing CMDGA
Clear Filters
Annotation type
10
candidate regulatory elements
7
target gene predictions
5
chromatin state
1
accessible chromatin
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
14
large intestine
7
sigmoid colon
5
keratinocyte
5
transverse colon
4
colon epithelial cell
4
fibroblast of dermis
4
foreskin keratinocyte
3
HCT116
3
foreskin fibroblast
3
skin fibroblast
2
HT-29
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
iPS DF 19.11
2
lower leg skin
2
mucosa of rectum
2
muscle layer of colon
1
COLO829
1
GM23248
1
HCT-116 cell
1
RPMI7951
1
SK-MEL-5
1
SW480
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
rectum smooth muscle tissue
1
skin of body
Organ
7
intestine
7
large intestine
0
skin of body
Life stage
4
adult
1
child
Date released
5
September, 2022
1
March, 2020
1
May, 2021
Software used
5
r
1
abc
1
nospecificsoft_customcode
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR210CXW
released
Annotation file set
: Target gene predictions for BSS01548 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120ZJL
released
Annotation file set
: Target gene predictions for BSS01547 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR255CFA
released
Annotation file set
: Target gene predictions for BSS01545 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR205RPT
released
Annotation file set
: Target gene predictions for BSS01543 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759TNV
released
Annotation file set
: Target gene predictions for BSS01542 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284ZHE
released
Annotation file set
: enhancer-gene predicton of sigmoid_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR074OIQ
released
Annotation file set
: A target gene prediction annotation in Human Sigmoid Colon of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP