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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
22
foreskin keratinocyte
21
keratinocyte
20
psoas muscle
19
foreskin fibroblast
18
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
13
skeletal muscle satellite cell
12
fibroblast of dermis
12
skin fibroblast
11
esophagus muscularis mucosa
10
dermis blood vessel endothelial cell
10
lower leg skin
9
skeletal muscle fiber
9
stomach smooth muscle
8
dermis lymphatic vessel endothelial cell
7
GM23248
7
LHCN-M2
7
gastroesophageal sphincter
7
type I muscle cell
7
type II muscle cell
6
iPS DF 4.7 Cell Line
6
skeletal muscle cell
6
skin of body
5
A673
5
RPMI7951
5
SJCRH30
5
SK-MEL-5
5
gastrocnemius medialis(Muscle - Skeletal)
5
iPS DF 19.11
5
left ventricle myocardium
5
myotube
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
rectum smooth muscle tissue
3
COLO829
3
epidermal melanocyte
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
basal cell of epidermis
2
cardiac muscle myoblast
2
forelimb muscle
2
granular cell of epidermis
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
somatic muscle myotube
1
BJ
1
HGPS cell
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
hindlimb muscle
1
iPS DF 4.7
1
rectal smooth muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
smooth muscle tissue
Organ
5
musculature of body
0
skin of body
Life stage
1
unknown
Date released
3
February, 2021
1
May, 2021
1
October, 2022
Software used
2
macs
1
abc
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR198EWK
released
Annotation file set
: Binding sites annotation for myotube (HSMMtube) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR706TCC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE myotube
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR745RPS
released
Annotation file set
: Histone modifications annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR122YGR
released
Annotation file set
: Binding sites annotation for Muscle Myotube from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR594LRQ
released
Annotation file set
: enhancer-gene predicton of myotube_originated_from_skeletal_muscle_myoblast-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP