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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
2
cell line
2
primary cell
1
in vitro differentiated cells
Biosample term
9
keratinocyte
5
foreskin fibroblast
5
skin fibroblast
3
GM23248
3
foreskin keratinocyte
3
iPS DF 4.7 Cell Line
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
skin of forearm
2
skin of prepuce of penis
1
RPMI7951
1
SK-MEL-5
1
basal cell of epidermis
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
granular cell of epidermis
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Organ
5
connective tissue
5
skin of body
0
skeleton
Date released
2
February, 2021
2
June, 2020
1
November, 2021
Software used
5
macs
4
r
2
chromhmm
1
abc
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR579NBW
released
Annotation file set
: Accessible chromatin annotation of Fibroblast (Epithelial) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR818EUJ
released
Annotation file set
: Histone modifications annotation for Epidermis VH10 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492VKD
released
Annotation file set
: Binding sites annotation for Epidermis VH10 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR583DSL
released
Annotation file set
: Accessible chromatin annotation for Epidermis Skin fibroblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR595LTD
released
Annotation file set
: Accessible chromatin annotation for Epidermis Fetal skin from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP