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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
22
foreskin keratinocyte
21
keratinocyte
19
foreskin fibroblast
12
fibroblast of dermis
12
skin fibroblast
10
dermis blood vessel endothelial cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
7
GM23248
6
iPS DF 4.7 Cell Line
6
skin of body
5
RPMI7951
5
SK-MEL-5
5
iPS DF 19.11
4
dermis microvascular lymphatic vessel endothelial cell
4
femur
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
COLO829
3
arm bone
3
epidermal melanocyte
3
leg bone
3
suprapubic skin
2
basal cell of epidermis
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
4
bone element
4
limb
4
skeleton
0
skin of body
Life stage
4
embryonic
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
embryo
Showing 4 of 4 results
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Download
FileSet
DSR109XPD
released
Annotation file set
: Candidate regulatory elements for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR142LPO
released
Annotation file set
: Target gene predictions for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR009WUH
released
Annotation file set
: Chromatin states for BSS00330 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499GVD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE femur
Lab:
AMP-T2D consortium
Project:
AMP