Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
29
fibroblast
22
pericyte cell
17
osteoblast
16
fibroblast of lung
16
foreskin fibroblast
12
fibroblast of cardiac tissue
12
fibroblast of dermis
9
hepatic stellate cell
9
skin fibroblast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
pancreatic stellate cell
7
mesangial cell
7
mesenchymal stem cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
4
adipocyte
4
adult endothelial progenitor cell
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
preadipocyte
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
brain pericyte
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
articular chondrocyte
2
columnar chondrocyte
2
enterocyte of epithelium of small intestine
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
small intestine goblet cell
2
stromal cell
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
Organ
5
connective tissue
0
small intestine
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR197PKJ
released
Annotation file set
: Candidate regulatory elements for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR299QOE
released
Annotation file set
: Target gene predictions for BSS00344 fibroblast of peridontal ligament from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR210JRU
released
Annotation file set
: Chromatin states for BSS00344 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR534TSK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of peridontal ligament
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585DKC
released
Annotation file set
: Accessible chromatin annotation for Others HPdLF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP