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Schema
Citing CMDGA
Clear Filters
Annotation type
11
candidate regulatory elements
8
chromatin state
7
target gene predictions
3
accessible chromatin
2
variant allelic effects
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
RNA-seq
Available data
3
bed bed3+
3
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
8
heart
5
right atrium auricular region
4
coronary artery
4
fibroblast of cardiac tissue
4
heart left ventricle
3
smooth muscle cell of the coronary artery
2
endocardial cell
2
heart right ventricle
2
left cardiac atrium
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac endothelial cell
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
enterocyte of epithelium of small intestine
1
fetal heart
1
left ventricle myocardium
1
mitral valve
1
pulmonary valve
1
right cardiac atrium
1
small intestine
1
small intestine goblet cell
1
tricuspid valve
1
ventricular cardiac muscle cell
Organ
4
heart
0
small intestine
Life stage
3
adult
1
fetal
Date released
2
January, 2020
1
February, 2020
1
October, 2019
Software used
3
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR441UPN
released
Annotation file set
: Gene expression levels of heart left ventricle from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR193GSB
released
Annotation file set
: Accessible chromatin annotation of heart left ventricle fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR231CTC
released
Annotation file set
: Accessible chromatin annotation of heart left ventricle adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR571URP
released
Annotation file set
: Heart left ventricle accessible chromatin annotation of overlapping ATAC-seq sites from 2 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP