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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
90
heart
63
small intestine
34
heart left ventricle
21
coronary artery
19
heart right ventricle
19
right atrium auricular region
17
fibroblast of cardiac tissue
12
left cardiac atrium
9
duodenal mucosa
8
muscle layer of duodenum
8
right cardiac atrium
7
MG63
7
smooth muscle cell of the coronary artery
6
OCI-LY1
6
SJSA1
5
L1-S8
5
OCI-LY3
5
left ventricle myocardium
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
bone tissue
4
cardiac fibroblast
4
femur
4
megakaryocyte
4
stromal cell of bone marrow
3
arm bone
3
endocardial cell
3
leg bone
3
mononuclear cell of bone marrow
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
enterocyte of epithelium of small intestine
2
small intestine goblet cell
2
ventricular cardiac muscle cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
aortic valve
1
bone cell
1
bone marrow cell
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fetal heart
1
mitral valve
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulmonary valve
1
tricuspid valve
Organ
4
bone element
4
bone marrow
4
connective tissue
0
heart
0
small intestine
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR748MDW
released
Annotation file set
: Candidate regulatory elements for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR315JBI
released
Annotation file set
: Chromatin states for BSS01661 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR880WUR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE stromal cell of bone marrow
Lab:
AMP-T2D consortium
Project:
AMP