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Schema
Citing CMDGA
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Annotation type
9
candidate regulatory elements
7
target gene predictions
5
chromatin state
3
binding sites
2
accessible chromatin
2
histone modifications
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
cell line
1
primary cell
Biosample term
17
small intestine
6
MCF-7
4
mammary gland epithelial cell
3
luminal epithelial cell of mammary gland
2
T47D
2
duodenal mucosa
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
1
enterocyte of epithelium of small intestine
1
fibroblast of mammary gland
1
mammary epithelial cell
1
small intestine goblet cell
Disease term
5
breast cancer
Organ
6
mammary gland
1
epithelium
1
intestine
1
small intestine
Life stage
5
adult
Date released
5
September, 2022
1
May, 2021
1
November, 2021
Software used
5
r
2
abc
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
6
AMP
1
ENCODE
RFA
6
AMP
1
ENCODE3
Showing 7 of 7 results
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FileSet
DSR208VEV
released
Annotation file set
: Target gene predictions for BSS01244 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR811JFD
released
Annotation file set
: Target gene predictions for BSS01243 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR701UHJ
released
Annotation file set
: Target gene predictions for BSS01240 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR432GFP
released
Annotation file set
: Target gene predictions for BSS01235 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131CPD
released
Annotation file set
: Target gene predictions for BSS01226 MCF-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802OCO
released
Annotation file set
: Target gene predictions of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP