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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
63
small intestine
14
prostate gland
12
epithelial cell of prostate
10
22Rv1
9
duodenal mucosa
8
muscle layer of duodenum
7
LNCaP clone FGC
7
PC-3
7
RWPE1
6
LNCAP
4
C4-2B
4
RWPE2
4
VCaP cell
4
femur
3
arm bone
3
leg bone
2
enterocyte of epithelium of small intestine
2
small intestine goblet cell
1
VCaP
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
luminal epithelial cell of prostatic duct
1
prostate
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Organ
4
bone element
4
limb
4
skeleton
0
prostate gland
0
small intestine
Life stage
4
embryonic
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR109XPD
released
Annotation file set
: Candidate regulatory elements for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR142LPO
released
Annotation file set
: Target gene predictions for BSS00330 femur from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR009WUH
released
Annotation file set
: Chromatin states for BSS00330 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR499GVD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE femur
Lab:
AMP-T2D consortium
Project:
AMP