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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
1
variant allelic effects
Annotation Category
2
Target gene links
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
snATAC-seq
2
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
86
stomach
9
stomach smooth muscle
7
gastroesophageal sphincter
4
mucosa of stomach
3
parietal cell
3
peptic cell
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
Organ
5
epithelium
5
stomach
Date released
4
November, 2021
1
February, 2024
Software used
2
abc
2
macs
1
deltasvm
Lab
5
Bing Ren, UCSD
Project
4
ENCODE
1
AMP
RFA
4
ENCODE3
1
AMP
Showing 5 of 5 results
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Download
FileSet
DSR212MAT
released
Annotation file set
: Target gene predictions of Gastric Neuroendocrine Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR771TGI
released
Annotation file set
: Target gene predictions of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR067ONR
released
Annotation file set
: Accessible chromatin annotation of Gastric Neuroendocrine Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR570UBU
released
Annotation file set
: Accessible chromatin annotation of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR552HSG
released
Annotation file set
: Variant allelic effects annotation of Gastric chief cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP