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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
1
eQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
2
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
ChIP-seq
64
DNase-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
2
RNA-seq
Available data
5
bed bed3+
1
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
7
stomach
3
parietal cell
3
peptic cell
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
Organ
7
stomach
Life stage
1
adult
Date released
3
June, 2020
2
May, 2021
1
January, 2022
1
March, 2024
Software used
3
macs
2
abc
1
qTLtools
1
r
Lab
5
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
annotation_type_category!
ChIP-seq
Showing 7 of 7 results
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Download
FileSet
DSR007TCR
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Stomach.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR542EVP
released
Annotation file set
: stomach eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR355FEE
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR769DZK
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Gastric primary sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936OND
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Fetal stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP