Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
chromatin state
2
candidate regulatory elements
2
target gene predictions
Annotation Category
5
cis-regulatory elements
2
Target gene links
Annotation type Category
7
ChIP-seq
4
DNase-seq
Available data
5
bed bed3+
2
bed bed9
File set status
7
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
64
stomach
7
stomach smooth muscle
3
gastroesophageal sphincter
3
mucosa of stomach
3
parietal cell
3
peptic cell
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
Organ
7
musculature of body
7
stomach
Life stage
6
adult
Date released
6
September, 2022
February, 2021
1
August, 2017
Software used
4
r
3
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
month_released!
February, 2021
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
FileSet
DSR422YSS
released
Annotation file set
: Candidate regulatory elements for BSS01660 stomach smooth muscle from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR424EOF
released
Annotation file set
: Candidate regulatory elements for BSS01659 stomach smooth muscle from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR346MCM
released
Annotation file set
: Target gene predictions for BSS01660 stomach smooth muscle from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125HFK
released
Annotation file set
: Target gene predictions for BSS01659 stomach smooth muscle from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR842KSL
released
Annotation file set
: Chromatin states for BSS01660 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR289BEC
released
Annotation file set
: Chromatin states for BSS01659 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR469602
released
Annotation file set
: ChromHMM 13-state model for stomach smooth muscle
Lab:
Stephen Parker, UMich
Project:
AMP