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Citing CMDGA
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Annotation type
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
86
stomach
9
stomach smooth muscle
7
gastroesophageal sphincter
4
mucosa of stomach
2
parietal cell
2
peptic cell
1
esophagus - gastroesophageal junction
foveolar cell of stomach
1
gastric (mucosa of stomach)
1
stomach neuroendocrine cell
Organ
2
epithelium
2
stomach
Date released
1
February, 2024
1
November, 2021
Software used
1
abc
1
deltasvm
Lab
2
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
files.file_type!
bigWig
biosample_term_name!
foveolar cell of stomach
Showing 2 of 2 results
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Download
FileSet
DSR771TGI
released
Annotation file set
: Target gene predictions of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR552HSG
released
Annotation file set
: Variant allelic effects annotation of Gastric chief cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP