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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
86
stomach
54
H1-hESC
23
trophoblast cell
16
H9
16
chorionic villus
11
trophoblast
10
endodermal cell
9
stomach smooth muscle
8
mesodermal cell
7
gastroesophageal sphincter
6
H7-hESC
6
HUES6
6
HUES8
5
CyT49
5
H4
5
HUES64
5
ectodermal cell
4
ELF-1
4
HUES48
4
UCSF-4
4
embryonic facial prominence
4
mucosa of stomach
3
ES-I3
3
cardiac mesoderm primordium
3
hESC H9
3
parietal cell
3
peptic cell
3
primordial germ cell
2
first pancreatic bud
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
H1
1
H7
1
cardiogenic mesoderm
1
embryonic fibroblast
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
3
epithelium
3
stomach
0
embryo
Date released
2
November, 2021
1
February, 2024
Software used
1
abc
1
deltasvm
1
macs
Lab
3
Bing Ren, UCSD
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR283LYA
released
Annotation file set
: Target gene predictions of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR973TTL
released
Annotation file set
: Accessible chromatin annotation of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR855UCF
released
Annotation file set
: Variant allelic effects annotation of Parietal cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP